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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6801621 chr3:96807766 G/A PRPF31 chr19:54618790-54635150:+ -0.37 -5.93 5.73E-9 Box Plot
THCA rs6801624 chr3:96807782 C/G PRPF31 chr19:54618790-54635150:+ 0.37 6.16 1.57E-9 Box Plot
THCA rs6802945 chr3:90270589 A/G STX19 chr3:93733213-93747454:- -0.42 -6.5 2.0E-10 Box Plot
THCA rs68033410 chr1:111154537 A/G DLD chr7:107531415-107572175:+ -0.28 -6.34 5.25E-10 Box Plot
THCA rs6805596 chr3:125775818 G/A ROPN1 chr3:123687368-123711025:- 0.33 5.95 5.07E-9 Box Plot
THCA rs68072215 chr6:26377927 T/C RNF5P1 chr8:38458179-38458718:- 0.61 6.48 2.29E-10 Box Plot
THCA rs68072215 chr6:26377927 T/C ZFP57 chr6:29640169-29648887:- 0.54 5.93 5.69E-9 Box Plot
THCA rs68085045 chr2:101063220 ACTGAGTCAG/A LOC285359 chr3:101431278-101432259:+ 0.35 5.9 6.72E-9 Box Plot
THCA rs6808519 chr3:125773438 A/G ROPN1 chr3:123687368-123711025:- 0.32 5.88 7.8E-9 Box Plot
THCA rs68085269 chr6:26762321 CAT/C ZNF322B chr9:99957633-99961910:- -0.65 -10.43 4.56E-23 Box Plot
THCA rs68112369 chr6:26365759 T/C RNF5P1 chr8:38458179-38458718:- 0.59 6.34 5.22E-10 Box Plot
THCA rs68141011 chr6:28217797 G/T BTN3A2 chr6:26365387-26378548:+ -0.54 -10.42 4.69E-23 Box Plot
THCA rs68156792 chr21:18947310 TAC/T CXADRP3 chr18:14477954-14499277:- -0.61 -8.46 3.28E-16 Box Plot
THCA rs68188794 chr6:28080777 T/C BTN3A2 chr6:26365387-26378548:+ -0.85 -12.03 2.75E-29 Box Plot
THCA rs68188794 chr6:28080777 T/C RNF5P1 chr8:38458179-38458718:- 0.7 6.2 1.23E-9 Box Plot